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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4980439 chr11:49342246 G/C FOLH1B chr11:89372395-89431886:+ -0.35 -6.17 1.47E-9 Box Plot
THCA rs4980440 chr11:49386017 C/T FOLH1B chr11:89372395-89431886:+ -0.35 -6.14 1.78E-9 Box Plot
THCA rs4980442 chr11:49445016 G/T FOLH1B chr11:89372395-89431886:+ -0.34 -6.06 2.74E-9 Box Plot
THCA rs4980444 chr11:49550764 T/A FOLH1B chr11:89372395-89431886:+ -0.35 -6.44 3.0E-10 Box Plot
THCA rs4980446 chr11:49575743 A/C FOLH1B chr11:89372395-89431886:+ -0.35 -6.23 1.0E-9 Box Plot
THCA rs498213 chr17:15572147 A/G ZNF286B chr17:18561742-18585575:- 0.69 13.28 1.7E-34 Box Plot
THCA rs498951 chr5:49534515 G/A LOC647121 chr1:121260910-121313686:+ -0.36 -7.64 1.16E-13 Box Plot
THCA rs4992353 chr16:16357220 G/C NOMO2 chr16:18511182-18573533:- -0.49 -7.25 1.65E-12 Box Plot
THCA rs5007182 chr7:65077870 A/G RABGEF1 chr7:66147151-66276451:+ 0.47 6.11 2.06E-9 Box Plot
THCA rs5009945 chr5:151679290 G/T FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs5009946 chr5:151679363 A/T FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs501068 chr18:2108767 G/T RPUSD2 chr15:40861499-40867142:+ 0.47 6 3.89E-9 Box Plot
THCA rs5012967 chr5:170810757 T/C CLEC2D chr12:9817565-9852151:+ -0.19 -5.97 4.67E-9 Box Plot
THCA rs5023364 chr8:3246688 T/C CSMD1 chr8:2792875-4852494:- -0.34 -6.44 2.83E-10 Box Plot
THCA rs5023365 chr8:3246612 G/A CSMD1 chr8:2792875-4852494:- -0.33 -6.18 1.39E-9 Box Plot